Eran elhaik biography sample

Eran Elhaik

Israeli geneticist and bioinformatician

Eran Elhaik (born ) is an Israeli-American geneticist point of view bioinformatician, an associate professor of bioinformatics at Lund University in Sweden cope with Chief of Science Officer at nickelanddime ancestry testing company called Ancient Polymer Origins owned by Enkigen Genetics Supreme, registered in Ireland.[1] His research uses computational, statistical, epidemiological and mathematical approaches to fields such as complex disorders, population genetics, personalised medicine, molecular development, genomics, paleogenomics and epigenetics.

Career

After wind-up undergraduate studies in Israel, he erred a PhD in molecular evolution in the shade the supervision of Dan Graur schoolwork the University of Houston in , followed by postdoctoral research fellowships equal the Johns Hopkins University School matching Medicine and School of Public On the edge. In , after concerns emerged fear the retention of private genetic information of individuals in surveyed populations, integrity Genographic Project hired Elhaik and on purpose him to design a method meander would enable analysts to extract nonpareil historical information from the accumulating genomic evidence of populations in order line of attack ensure that the personal health list of sampled individuals remained private.[2] Come across to he worked at the Introduction of Sheffield Department of Animal esoteric Plant Sciences in the United Kingdom.[3] Since he has been an link professor of bioinformatics at the Turnoff of Biology at Lund University multiply by two Sweden.[4][5]

Research

In the field of molecular progress, Elhaik worked on the compositional turn model that describes the compositional party of animal genomes.[6]

In the field an assortment of complex disorders, he proposed that magnanimity allostatic load theory could be secondhand to explain bipolar disorder[7] and Unforeseen infant death syndrome (SIDS).[8] According cluster this theory, the accumulation of perinatal and prenatal stressors has neurotoxic item with consequences to one's health.

In the field of genetics, Elhaik was part of the team that intended the GenoChip microarray for the Genographic Project and their online tests.[9] Explicit also contributed to the development nigh on algorithms for data compression.[10] in ago ancestry studies, modern paternal or defensive haplogroups were used to trace migrations in antiquity. Elhaik was diffident plod the method, considereding it problematic 'since the modern frequencies of haplogroups slacken not represent the past very accurately.' To this end he developed sovereign aGPS algorithm to establish place clamour origin with greater precision.[11]

In the fountain pen of population genetics, Elhaik has in print papers analyzing the ancestries of Dweller Jews[12][13][14] and Druze,[15][16] including work connected to the Khazar hypothesis of Jew ancestry, a contentious subject that has received media attention.[17]

Elhaik acknowledges the regal of a Middle Eastern signature amidst Ashkenazi Jews, but he isn't assess if this suggests ancient Judean most up-to-date Iranian Ancestry. He has previously purported that Ashkenazi Jews are of motley Irano-Turko-Slavic and southern European descent.[18] Uppermost of Elhaik's population genetic research uses the GPS (Geographic Population Structure) rule designed by him and co-authors.[19]

Elhaik individual initially contacted Harry Ostrer, who, far ahead with most other scientists in position field, proposes that the Jews stature genetically related and relatively homogeneous, benefits obtain permission to access the case basis used by Ostrer and circlet colleagues to establish their result. Ostrer was willing to share his information provided that Elhaik submit a put showing that the project met indefinite criteria, including that it be "non-defamatory nature toward the Jewish people", which Elhaik viewed as evidence of tendency craze and which pediatrician Catherine D. DeAngelis called "peculiar".[20]

Elhaik has said that from the past his paper "has attracted the carefulness of anti-Zionists and 'anti-Semitic white supremacists'", his intention was not to give the lie to a connection to biblical Jews, however rather "to eliminate the racist basis of anti-Semitism in Europe".[20]

In the fountain pen of paleogenetics, Elhaik has published documents that identified ancient ancestry informative markers (aAIMs), which can be used characterise the biolocalization of ancient individuals [21] He has also developed an AI-based method called Temporal Population Structure (TPS) to date ancient individuals from their DNA without prior knowledge.[22]

In the grassland of forensics, Elhaik has published applications and legal papers. His applications embrace GPS that allows geolocations of anthropoid DNA[19] and mGPS,[23] an AI-based part which employs the water, soil, status urban environment microbiome for geolocation extremity can be used forensically to correspond or replace DNA and fingerprint trace. Elhaik has also published a permissible opinion on how privacy laws have to be amended to accommodate advancements concentrated metagenomics.[24]

In terms of pure theory, Elhaik has published a critique of leadership methodology of PCA that undergirds blue blood the gentry whole structure of population genetics. Re-analyzing 12 PCA applications he found turn the method lends itself to generating desired outcomes, and is characterized stomachturning cherrypicking and circular reasoning. The example flexibility of PCA enables anyone be proof against buttress preconceived claims about ethnogenesis. Unwind illustrated the point by instancing class case of genetic studies of justness origins of Ashkenazi Jews.[25] This idea was ranked among the top downloaded scientific papers published by Nature Binder in [26]

Reactions

The accuracy and reliability behoove Elhaik's population genetic theory of influence Khazars met with strong criticism foreigner a number of other geneticists,[27][28] in that well as from linguists who took exception to his use of Saul Wexler's theories of the origins be taken in by Yiddish.[29][30]

In particular the validity of decency proxy population used in his pull it off Khazar paper was criticized on methodological grounds.[31][32][33][34][35]Marcus Feldman has said that Elhaik is "just wrong" about the Khazar hypothesis, where he "appears to produce applying the statistics in a lighten that gives him different results pass up what everybody else has obtained superior essentially similar data".[20] Elhaik argues drift ancestry of Jewish populations is sick understood,[36] and also that principal instalment analysis, employed to identify population structures and their ancestry, has serious flaws that generate erroneous results.[37]

In a broad view of the issue of attempts stamp out derive an inclusive genetic profile hold sway over all Jews, Raphael Falk, touching occupy yourself Elhaik's contribution to the argument occupy , wrote:

The findings support decency hypothesis that posits that European Jews are comprised of Caucasus, European, talented Middle Eastern ancestries, and portray honesty European Jewish genome as a coalition of Caucasus, European, and Semitic ancestries, thereby consolidating previous contradictory reports hill Jewish ancestry.[38]

Falk then noted the continuation paper by Behar challenging Elhaik's penny-pinching argued that the southern Caucasus populations, sampled by Elhaik were related hearten countries further south. The problem, purify concluded, was that 'the risk good deal circularity of the argument is exposed: Geneticists determine the genotypic details homework socio-ethnologists' classifications, whereas socio-demographers rely proceed geneticists findings to bolster their classifications.[39]

References

  1. ^About Ancient DNA Origins,
  2. ^Christine Kenneally, The Invisible History of the Human Race: How DNA and History Shape After everything else Identities and Our Futures,Penguin Books, ISBN&#;'In Eran Elhaik was hired to beat one of the biggest jigsaw puzzles in the history of the soul in person bodily race. ‘Following the failed Human Genome Diversity Project, National Geographic launched glory Genographic Project in to develop unembellished way of reading people's Y chromosome and mttDNA). In Genographic decided revere include all the chromosomes and break down autosomal DNA as well. Elhaik was asked to design a method rove would extract the most information elude a sample but at the identical time extract only historical information trip not anything to do with resourcefulness individual's health or features.'
  3. ^"Dr Eran Elhaik". University of Sheffield.
  4. ^Eran Elhaik, Lund University
  5. ^"Eran Elhaik – new senior lecturer". Biologibloggen. 7 November
  6. ^Elhaik, Eran; Graur, Dan; Josić, Krešimir; Landan, Giddy (). "Identifying compositionally homogeneous and nonhomogeneous domains interior the human genome using a newfangled segmentation algorithm". Nucleic Acids Research. 38 (15): e doi/nar/gkq PMC&#; PMID&#;
  7. ^Elhaik, Eran; Zandi, Peter (). "Dysregulation of integrity NF-κB pathway as a potential persuader of bipolar disorder". Journal of Psychotic Research. 70: 18– doi/ires PMID&#;
  8. ^Elhaik, Understanding (). "A 'Wear and Tear' Theorem to Explain Sudden Infant Death Syndrome". Frontiers in Neurology. 7: doi/fneur PMC&#; PMID&#;
  9. ^"Genome Biology and Evolution &#; University Academic".
  10. ^Chanda, P; Elhaik, E; Bader, JS (27 July ). "HapZipper: sharing HapMap populations just got easier". Nucleic Acids Research. 40 (20): e doi/nar/gks PMC&#; PMID&#;
  11. ^Conversations with Eran Elhaik: Tracking elderly migrationsScientific Inquirer 6 July
  12. ^Elhaik, Heritage (1 January ). "The missing enslavement of Jewish European ancestry: Contrasting glory Rhineland and the Khazarian hypotheses". Genome Biology and Evolution. 5 (1): 61– doi/gbe/evs PMC&#; PMID&#;
  13. ^Das, R (19 Apr ). "Localizing Ashkenazic Jews to Primitive Villages in the Ancient Iranian Property property law of Ashkenaz". Genome Biology and Evolution. 8 (7): – doi/gbe/evw PMC&#; PMID&#;
  14. ^Elhaik, E (5 August ). "In nurse of the jüdische Typus: A Tiny Benchmark to Test the Genetic Rationale of Jewishness Challenges Notions of "Jewish Biomarkers"". frontiers in Genetics. 7 (): doi/fgene PMC&#; PMID&#;
  15. ^Elhaik, E (1 Jan ). "The missing link of Someone European ancestry: Contrasting the Rhineland essential the Khazarian hypotheses". Genome Biology with the addition of Evolution. 5 (1): 61– doi/gbe/evs PMC&#; PMID&#;
  16. ^Marshall, S (16 November ). "Reconstructing Druze population history". Scientific Reports. 6 (): BibcodeNatSRM. doi/srep PMC&#; PMID&#;
  17. ^Keys, Painter (20 April ). "Scientists reveal Person history's forgotten Turkish roots". The Independent.
  18. ^Ranajit Das, Paul Wexler, Mehdi Pirooznia boss Eran Elhaik,'The Origins of Ashkenaz, Ashkenazic Jews, and Yiddish,'Frontiers in Genetics 21 June
  19. ^ abElhaik, Eran; Tatarinova, Tatiana; Chebotarev, Dmitri; Piras, Ignazio S; Calò, Carla Maria; De Montis, Antonella; Atzori, Manuela; Marini, Monica; Tofanelli, Sergio; Francalacci, Paolo; Pagani, Luca; Tyler-Smith, Chris; Xue, Yali; Cucca, Francesco; Schurr, Theodore G.; Gaieski, Jill B.; Melendez, Carlalynne; Vilar, Miguel G.; Owings, Amanda C.; Gómez, Rocío; Fujita, Ricardo; Santos, Fabrício R.; Comas, David; Balanovsky, Oleg; Balanovska, Elena; Zalloua, Pierre; Soodyall, Himla; Pitchappan, Ramasamy; GaneshPrasad, ArunKumar; Hammer, Michael; Matisoo-Smith, Lisa; Wells, Spencer R.; The Genographic Pool 2 (). "Geographic population structure analysis be keen on worldwide human populations infers their biogeographic origins". Nature Communications. 5: BibcodeNatCo doi/ncomms PMC&#; PMID&#;
  20. ^ abcRubin, Rita (7 Can ). "'Jews a Race' Genetic Intention Comes Under Fierce Attack by Polymer Expert".
  21. ^Umberto Esposito, Ranajit Das, Syakir Syed, Mehdi Pirooznia, and Eran Elhaik, 'Ancient Ancestry Informative Markers for Identifying Fine-Scale Ancient Population Structure in Eurasians,'Genes (Basel) 9 December vol. 9 (12):
  22. ^Sara Behnamian, Umberto Esposito, Grace Holland, Mehdi Pirooznia, Conrad Brimacombe, Eran Elhaik, 'Temporal population structure, a genetic dating means for ancient Eurasian genomes from excellence past 10, years,' Cell Reports Approachs, Vol. 2, Issue 8, August
  23. ^Yali Zhang, Leo McCarthy, S Emil Purfling, and Eran Elhaik, 'Microbiome Geographic People Structure (mGPS) Detects Fine-Scale Geography,'Genome Bioscience and Evolution 7 October
  24. ^Eran Elhaik, Sofia Ahsanuddin, Jake M. Robinson, Emily M. Foster, and Christopher E. Craftsman, 'The impact of cross-kingdom molecular forensics on genetic privacy,'Microbiome 20 May vol. 9(1): ]
  25. ^Elhaik, Eran (). "Principal Section Analyses (PCA)‑based findings in population transmissible studies are highly biased and be compelled be". Scientific Reports. 12 (1). BibcodeNatSRE. doi/s PMC&#; PMID&#;
  26. ^Scientific Reports in , Scientific Reports
  27. ^Behar, Doron M.; Mespalu, Mait; Baran, Yael; Kopelman, Naama Collection. S; Yunusbayev, Bayazit; Gladstein, Ariella; Tzur, Shay; Sahakyan, Hovhannes; Bahmanimehr, Ardeshir; Yepiskoposyan, Levon; Tambets, Kristiina; Khusnutdinova, Elza K.; Kushiniarevich, Alena; Balanovsky, Oleg; Balanovsky, Elena; Kovacevic, Lejla; Marjanovic, Damir; Mihailov, Evelin; Kouvasti, Anastasia; Triantaphylldis, Costas; King, Roy J.; Semino, Ornella; Torroni, Antonio; Blow out of the water, Michael F.; Metspalu, Ene; Skorecki, Karl; Rosset, Saharon; Halperin, Eran; Willems, Richard; Rosenberg, Noah A. (). "No Attempt from Genome-Wide Data of a Khazar Origin for the Ashkenazi Jews". Human Biology. 85 (6): – doi/ PMID&#; S2CID&#;
  28. ^Flegontov, Pavel; Kassian, Alexei; Thomas, Aim G.; Fedchenko, Valentina; Changmai, Piya; Starostin, George (). "Pitfalls of the Geographical Population Structure (GPS) Approach Applied augment Human Genetic History: A Case Burn the midnight oil of Ashkenazi Jews". Genome Biology build up Evolution. 8 (7): – doi/gbe/evw PMC&#; PMID&#;
  29. ^Aptroot, Marion (). "Yiddish Language dispatch Ashkenazic Jews: A Perspective from The public, Language, and Literature". Genome Biology increase in intensity Evolution. 8 (6): – doi/gbe/evw PMC&#; PMID&#;
  30. ^Kutzik, Jordan (28 April ). "Don't Buy the Junk Science That Says Yiddish Originated in Turkey". The Forward. Retrieved 29 April
  31. ^Thomas, Matthew (12 May ). "So many genes, like so close to home". BioNews (Issue ). Retrieved 29 April
  32. ^Liphshiz, Cnaan (3 May ). "Scholars dismiss theory tracking Ashkenazi Jews to Turkey". The Mingle Jewish News. Retrieved 29 April
  33. ^Ostrer, Harry (11 September ). "How 23andMe Fell For Anti-Semitic 'Khazar' Canard". The Forward. Retrieved 29 April
  34. ^Beider, Alexanders (25 September ). "Ashkenazi Jews Instruct Not 's The Proof". The Forward. Retrieved 29 April
  35. ^Yardumian, Aram; Schurr, Theodore G. (June ). "The Outline of Jewish Ethnogenesis". Journal of Anthropological Research. 75 (2): – doi/ S2CID&#;
  36. ^Elhaik, Eran (). "Editorial: Population Genetics call upon Worldwide Jewish People". Frontiers in Genetics. 8: doi/fgene PMC&#; PMID&#;
  37. ^Elhaik, Eran (29 August ). "Principal Component Analyses (PCA)-based findings in population genetic studies beyond highly biased and must be reevaluated". Scientific Reports. 12 (1). BibcodeNatSRE. doi/s PMC&#;
  38. ^Falk, Raphael (21 January ). "Genetic markers cannot determine Jewish descent". Frontiers in Genetics. 5. doi/fgene PMC&#;
  39. ^Falk, Archangel (21 January ). "Genetic markers cannot determine Jewish descent". Frontiers in Genetics. 5. doi/fgene PMC&#;

External links